| 2021 | |
| Westphal D, Wehner R, Meier F, Karreman M, Seifert M e:Med-Juniorverbund: MelBrainSys – Modellbasierte Vorhersage und experimentelle Validierung neuer therapeutischer Interventionen für Melanom-Hirnmetastasen Spitzenforschung in der onkologischen Dermatologie. Innovationen und Auszeichnungen 2021, ALPHA Informations-GmbH, 2021, 38-48 | |
| 2020 | |
| Johansson P, Klein-Hitpass L, Budeus B, Kuhn M, Lauber C, Seifert M, Roeder I, Pförtner R, Stuschke M, Dührsen U, Eckstein A, Dürig J, Küppers R Identifying Genetic Lesions in Ocular Adnexal Extranodal Marginal Zone Lymphomas of the MALT Subtype by Whole Genome, Whole Exome and Targeted Sequencing. Cancers 12(4) 2020, DOI Link | |
| Seifert M, Schackert G, Temme A, Schröck E, Deutsch A, Klink B Molecular Characterization of Astrocytoma Progression Towards Secondary Glioblastomas Utilizing Patient-Matched Tumor Pairs. Cancers 12(6) 2020, DOI Link | |
| Lauber C, Correia N, Trumpp A, Rieger MA, Dolnik A, Bullinger L, Roeder I, Seifert M Survival differences and associated molecular signatures of DNMT3A-mutant acute myeloid leukemia patients. Scientific reports 10(1) 2020, 12761, DOI Link | |
| Becker LL, Dafsari HS, Schallner J, Abdin D, Seifert M, Petit F, Smol T, Bok L, Rodan L, Krapels I, Spranger S, Weschke B, Johnson K, Straub V, Kaindl AM, Di Donato N, von der Hagen M, Cirak S The clinical-phenotype continuum in DYNC1H1-related disorders-genomic profiling and proposal for a novel classification. Journal of human genetics, 2020, DOI Link | |
| Brown RJP, Tegtmeyer B, Sheldon J, Khera T, Anggakusuma , Todt D, Vieyres G, Weller R, Joecks S, Zhang Y, Sake S, Bankwitz D, Welsch K, Ginkel C, Engelmann M, Gerold G, Steinmann E, Yuan Q, Ott M, Vondran FWR, Krey T, Ströh LJ, Miskey C, Ivics Z, Herder V, Baumgärtner W, Lauber C, Seifert M, Tarr AW, McClure CP, Randall G, Baktash Y, Ploss A, Thi VLD, Michailidis E, Saeed M, Verhoye L, Meuleman P, Goedecke N, Wirth D, Rice CM, Pietschmann T Liver-expressed Cd302 and Cr1l limit hepatitis C virus cross-species transmission to mice. Science advances 6(45) 2020, DOI Link | |
| 2019 | |
| Lauber C, Seifert M, Bartenschlager R, Seitz S Discovery of highly divergent lineages of plant-associated astro-like viruses sheds light on the emergence of potyviruses Virus Research 260, 2019, 38-48, DOI Link | |
| Liu Y, Mi Y, Mueller T, Kreibich S, Williams EG, Van Drogen A, Borel C, Frank M, Germain PL, Bludau I, Mehnert M, Seifert M, Emmenlauer M, Sorg I, Bezrukov F, Bena FS, Zhou H, Dehio C, Testa G, Saez-Rodriguez J, Antonarakis SE, Hardt WD, Aebersold R Multi-omic measurements of heterogeneity in HeLa cells across laboratories Nature Biotechnology, 2019, DOI Link | |
| Zakrzewski F, Gieldon L, Rump A, Seifert M, Grützmann K, Krüger A, Loos S, Zeugner S, Hackmann K, Porrmann J, Wagner J, Kast K, Wimberger P, Baretton G, Schröck E, Aust D, Klink B Targeted capture-based NGS is superior to multiplex PCR-based NGS for hereditary BRCA1 and BRCA2 gene analysis in FFPE tumor samples BMC Cancer 19(1) 2019, 396, DOI Link | |
| Seifert M, Peitzsch C, Gorodetska I, Börner C, Klink B, Dubrovska A Network-based analysis of prostate cancer cell lines reveals novel marker gene candidates associated with radioresistance and patient relapse PLoS computational biology 15(11) 2019, e1007460, DOI Link | |
| Biedermann J, Preussler M, Conde M, Peitzsch M, Richter S, Wiedemuth R, Abou-El-Ardat K, Krüger A, Meinhardt M, Schackert G, Leenders WP, Herold-Mende C, Niclou SP, Bjerkvig R, Eisenhofer G, Temme A, Seifert M, Kunz-Schughart LA, Schröck E, Klink B Mutant IDH1 Differently Affects Redox State and Metabolism in Glial Cells of Normal and Tumor Origin Cancers 11(12) 2019, DOI Link | |
| Kolbe E, Aleithe S, Rennert C, Spormann L, Ott F, Meierhofer D, Gajowski R, Stöpel C, Hoehme S, Kücken M, Brusch L, Seifert M, von Schoenfels W, Schafmayer C, Brosch M, Hofmann U, Damm G, Seehofer D, Hampe J, Gebhardt R, Matz-Soja M Mutual Zonated Interactions of Wnt and Hh Signaling Are Orchestrating the Metabolism of the Adult Liver in Mice and Human. Cell reports 29(13) 2019, 4553-4567.e7, DOI Link | |
| 2018 | |
| Klapproth E, Dickreuter E, Zakrzewski F, Seifert M, Petzold A, Dahl A, Schröck E, Klink B, Cordes N Whole exome sequencing identifies mTOR and KEAP1 as potential targets for radiosensitization of HNSCC cells refractory to EGFR and β1 integrin inhibition Oncotarget, 2018, 1-16, DOI Link | |
| Lauber C, Klink B, Seifert M Comparative analysis of histologically classified oligodendrogliomas reveals characteristic molecular differences between subgroups BMC Cancer 18, 2018, 399, DOI Link | |
| Mäder L, Blank AE, Capper D, Jansong J, Baumgarten P, Wirsik NM, Zachskorn C, Ehlers J, Seifert M, Klink B, Liebner S, Niclou S, Naumann U, Harter PN, Mittelbronn M Pericytes/vessel-associated mural cells (VAMCs) are the major source of key epithelial-mesenchymal transition (EMT) factors SLUG and TWIST in human glioma Oncotarget 9, 2018, 24041-24053, DOI Link | |
| Gladitz J, Klink B, Seifert M Network-based analysis of oligodendrogliomas predicts novel cancer gene candidates within the region of the 1p/19q co-deletion Acta Neuropathologica Communications, 2018, DOI Link | |
| 2017 | |
| Abou-El-Ardat K, Seifert M, Becker K, Eisenreich S, Lehmann M, Hackmann K, Rump A, Meijer G, Carvalho B, Temme A, Schackert G, Schröck E, Krex D, Klink B Comprehensive molecular characterization of multifocal glioblastoma proves its monoclonal origin and reveals novel insights into clonal evolution and heterogeneity of glioblastomas. Neuro Oncol 19(4) 2017, 546-57, DOI Link | |
| Vehlow A, Klapproth E, Storch K, Dickreuter E, Seifert M, Dietrich A, Bütof R, Temme A, Cordes N Adhesion- and stress-related adaptation of glioma radiochemoresistance is circumvented by beta-1 integrin/JNK co-targeting Oncotarget, 2017, 1-14, DOI Link | |
| Buder T, Deutsch A, Seifert M, Voss-Böhme A CellTrans: An R Package to Quantify Stochastic Cell State Transitions Bioinform Biol Insights 11, 2017, 1-14, DOI Link | |
| Seifert M, Beyer A regNet: An R package for network-based propagation of gene expression alterations Bioinformatics btx544, 2017, 1-4, DOI Link | |
| Alfonso JCL, Talkenberger K, Seifert M, Klink B, Hawkins-Daarud A, Swanson KR, Hatzikirou H, Deutsch A The biology and mathematical modelling of glioma invasion: a review Journal of The Royal Society Interface 14(136) 2017, DOI Link | |
| 2016 | |
| Seifert M, Friedrich B, Beyer A Importance of rare gene copy number alterations for personalized tumor characterization and survival analysis Genome Biology 17, 2016, 1-25, DOI Link | |
| 2015 | |
| Seifert M, Garbe M, Friedrich B, Mittelbronn M, Klink B Comparative transcriptomics reveals similarities and differences between astrocytoma grades. BMC cancer 15(1) 2015, 952, DOI Link | |